Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912205.1_cds_XP_016462240.1_55488
CDS Infomation

[gene=LOC107785447] [db_xref=GeneID:107785447] [protein=transcription factor bHLH49-like] [protein_id=XP_016462240.1] [location=complement(join(13370..13407,13491..13578,13692..13895,14000..14071,14458..14526,14642..14707,14796..15005,15121..15955,16631..16635))] [gbkey=CDS]
Sequence

ATGAGGATGGATATGGTTAGCAAGGATGATGCTGAGTCAGAAAAGAGGTGTGAGGATGCT
TTGAGCTTCCAATCACCAAATATGTCATCGGATTGGCAATTAAGTGGCAGCAATTTGACA
AATGCATCCGTCGGGATGGTTTCGAATAGCAATCCAATGGTAGATTCGTTCTGTGCTAGT
GTTTGGGATCATCCGATCAGTTCGTCAAACTTAGGCTTATGTGATACTAATATTCAAACG
ATTCATTGCACTACAAATGCAGACCGTCTGAGAACTAATGTTAATAGAATGCTTGCTATG
AGTTGGACTCAACCAAATGCAATGTCGTTGAAAGGGGACATGTTTGTACCCCCTACTCCT
GGTATGCTTCCTCAGAGCTTATCTCAGTTTCCAGCTGATTCAGGTTTTATTGAGAGAGCT
GCAAGATTTTCATGCTTCAGCGGAGGAAAAGTTGGTGATATGATGAACCCTTTTACCATC
CCTAGTTCTCCTAATACGTATCATAATGCACTGGCCTTGCATCGGCCGCAAGAGGTTTTC
GCTAGTAACATATTACAGTCACCTTCTGCTGCAATCAGTCAGAAGCAGCACGTAGGAAAC
GCGGTTGAAGGTTCTGAGGATGTTTCTTTACCTCTTGAACATGGGGCCACAGATAGAAGC
CCCATCAAGCATGAGAAAAATGAAAGCTTTGCTAGGTCTCTGGATGAAGCAAAGGAATGT
GTTGGCATCTCCGGAAATGAGTCTGATGAGGCTGAATGTAGCGGCCATCAAGAAGAAGTG
GAGGGTAAGGATTCTTCTGCTAGGGGCCTTGGCTCAAAGAAAAGGAAAAGAAGCGGTCAG
GATACAGAACTTGATCACACGAAGGGAGCACAACAACCACCAGCTGAACCGACAAAAGAT
CAAACAGAAATTCAGAAGGGAGAGCAAAACAGGCTTGGTGGAAAGAATAGTAAACAGGGG
TCTCAATCGGCGGATCCACCTAAAGAAGAATACATACACATTCGAGCTAAAAGAGGCCAG
GCAACAAATAGCCATAGTCTTGCAGAAAGACTAAGGAGGGAGAAGATCAGTGAACGGATG
AAATATCTTCAGGATCTTGTACCTGGTTGCAACAAGGTCACTGGGAAAGCAGTGATGCTG
GATGAAATCATTAATTATGTACAATCTCTTCAAAGACAGGTGGAGTTCCTCTCAGTGAAG
CTTGCAACGATAGACCCGCGGCTGGATTTTAATATTGATGGGCTCCTTGCAAAAGATATT
CTCCATTCACGAGCGGTTCCTTCTTCGTCACTTGCTTTTGCTCCTGATATGACAATGTCA
TATCACTCCTTGCAACAACTGCCAACCCCCCTACTTCAGTCAGGTCTTCCTGGTTTAGGA
AACTCTACCAATGCACTTCTTAGGTCGATCTATCCCCATTTATCCGCAACTAGTGGTGGC
TACAAAGAGTCCTCATCTCAGTTACCCAATATATGGGATGATGAGCTACATAATGTTGTC
GAGATGGGTCTCAGTACAAGTGCGCCCCTCCATAGTCAAAATTTAAGTGGTCCTTTGCCA
TCAGGCCAGATGAAAGAAGAATCTTGA

Peptide Sequence

PEP ID

XP_016462240.1
PEP Infomation

PREDICTED: transcription factor bHLH49-like [Nicotiana tabacum]
Sequence

MRMDMVSKDDAESEKRCEDALSFQSPNMSSDWQLSGSNLTNASVGMVSNSNPMVDSFCAS
VWDHPISSSNLGLCDTNIQTIHCTTNADRLRTNVNRMLAMSWTQPNAMSLKGDMFVPPTP
GMLPQSLSQFPADSGFIERAARFSCFSGGKVGDMMNPFTIPSSPNTYHNALALHRPQEVF
ASNILQSPSAAISQKQHVGNAVEGSEDVSLPLEHGATDRSPIKHEKNESFARSLDEAKEC
VGISGNESDEAECSGHQEEVEGKDSSARGLGSKKRKRSGQDTELDHTKGAQQPPAEPTKD
QTEIQKGEQNRLGGKNSKQGSQSADPPKEEYIHIRAKRGQATNSHSLAERLRREKISERM
KYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSVKLATIDPRLDFNIDGLLAKDI
LHSRAVPSSSLAFAPDMTMSYHSLQQLPTPLLQSGLPGLGNSTNALLRSIYPHLSATSGG
YKESSSQLPNIWDDELHNVVEMGLSTSAPLHSQNLSGPLPSGQMKEES

Transcript Sequence

Gene sequence data has not been registered.